An 'Shiny' App for Exploring scRNA-seq Data Processed in
'Seurat'
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Documentation for package ‘SeuratExplorer’ version 0.1.2
Help Pages
| cellRatioPlot | plot cell percentage barplot |
| explorer_body_ui | generate the body UI for each menu item specified in 'explorer_sidebar_ui' |
| explorer_server | server side functions related to 'explorer_sidebar_ui' |
| explorer_sidebar_ui | some menu items of the dashboard sidebar |
| getColors | getColors |
| get_counts_matrix | Helper function to extract counts matrix with proper handling |
| get_data_matrix | Helper function to extract data matrix with proper handling |
| join_layers_if_needed | Helper function to join layers for Assay5 objects |
| launchSeuratExplorer | Launch shiny app |
| prepare_gene_annotations | extract the features from row names or annotation slot of assays |
| server | Server |
| top_genes | Find Top Genes by Cell |
| ui | UI |