* using log directory 'd:/Rcompile/CRANpkg/local/4.5/missSBM.Rcheck' * using R version 4.5.1 (2025-06-13 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'missSBM/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'missSBM' version '1.0.5' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'missSBM' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 14.2.0' * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s] OK * checking whether the package can be loaded with stated dependencies ... [3s] OK * checking whether the package can be unloaded cleanly ... [3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s] OK * checking whether the namespace can be unloaded cleanly ... [4s] OK * checking loading without being on the library search path ... [3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [2s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [21s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [103s] ERROR Running 'spelling.R' [0s] Running 'testthat.R' [103s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(missSBM) > > test_check("missSBM") Adjusting Variational EM for Stochastic Block Model Dyads are distributed according to a 'undirected' SBM. Imputation assumes a 'covar-dyad' network-sampling process iteration #: 2 iteration #: 3 Adjusting Variational EM for Stochastic Block Model Dyads are distributed according to a 'undirected' SBM. Imputation assumes a 'dyad' network-sampling process iteration #: 2 iteration #: 3 Adjusting Variational EM for Stochastic Block Model Dyads are distributed according to a 'undirected' SBM. Imputation assumes a 'covar-node' network-sampling process iteration #: 2 iteration #: 3 iteration #: 4 Adjusting Variational EM for Stochastic Block Model Dyads are distributed according to a 'undirected' SBM. Imputation assumes a 'node' network-sampling process iteration #: 2 iteration #: 3 Tested sampling: - dyad - node - double-standard - block-node - block-dyad Adjusting Variational EM for Stochastic Block Model Imputation assumes a 'dyad' network-sampling process Initialization of 3 model(s). Tested sampling: - dyad - node - double-standard - block-node - block-dyadTested sampling: - dyad - node - double-standard - block-node - block-dyad sampling: dyad new better on connectivity node double-standard block-node new better on mixture Adjusting Variational EM for Stochastic Block Model iteration #: 2 iteration #: 3 iteration #: 4 iteration #: 5 iteration #: 6 iteration #: 7 iteration #: 8 iteration #: 9 iteration #: 10 iteration #: 11 iteration #: 12 iteration #: 13 iteration #: 14 iteration #: 15 iteration #: 16 iteration #: 17 iteration #: 18 iteration #: 19 iteration #: 20 iteration #: 21 iteration #: 22 iteration #: 23 iteration #: 24 iteration #: 25 iteration #: 26 iteration #: 27 iteration #: 28 Adjusting Variational EM for Stochastic Block Model Dyads are distributed according to a 'undirected' SBM. Imputation assumes a 'node' network-sampling process iteration #: 2 iteration #: 3 iteration #: 4 iteration #: 5 iteration #: 6 iteration #: 7 iteration #: 8 iteration #: 9 iteration #: 10 iteration #: 11 iteration #: 12 iteration #: 13 iteration #: 14 iteration #: 15 iteration #: 16 iteration #: 17 iteration #: 18 iteration #: 19 iteration #: 20 iteration #: 21 iteration #: 22 iteration #: 23 iteration #: 24 iteration #: 25 iteration #: 26 iteration #: 27 iteration #: 28 Adjusting Variational EM for Stochastic Block Model Imputation assumes a 'node' network-sampling process Initialization of 1 model(s). Performing VEM inference Model with 3 blocks. Adjusting Variational EM for Stochastic Block Model iteration #: 2 iteration #: 3 [ FAIL 1 | WARN 1 | SKIP 0 | PASS 402 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-MISSSBM-fit-without-covariate.R:51:7'): missSBM-fit works and is consistent for all samplings ── error(...) is not strictly less than `tol_truth`. Difference: 0.0545 [ FAIL 1 | WARN 1 | SKIP 0 | PASS 402 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [224s] OK * checking PDF version of manual ... [22s] OK * checking HTML version of manual ... [9s] OK * DONE Status: 1 ERROR