59c09864f129e09ec1f9c16a8615968f *DESCRIPTION
3934ec2b8c01cea5051dddcb855aa243 *NAMESPACE
79d2b20bee5c63d4e0cb7e7fcba5cf88 *NEWS.md
3dac03d3c973bf5da4639ed90b662d3b *R/convenience_wrappers.R
68adfb264d11182f36ab245497e71532 *R/data.R
2b22cf56171c2cb4bc1d98bb67208bf6 *R/deprecated.R
e20f1874bfc27da9d9495ae7b45f2dbb *R/fbar.R
d1029a19311c23bde4cbf6d2c4adb6c9 *R/gene_associate.R
e2f42338de534be5daf94a1c8f71fc4d *R/gene_expression_evaluation.R
d67d336e60f450d47fe6f59f8c25892a *R/metabolite_utilities.R
abb6622c55f7ee4a17d3e0fa4d4fa83d *R/parsing_and_conversion.R
8191e1518b150c022cd763c0e735c1a2 *README.md
15261e99fa1347aa405a3a8c28cd2bba *build/vignette.rds
a051a7fbc9039e7e15fc38900655cb93 *data/ecoli_core.rda
979dd6d63827591086198b894bd8efaf *data/iJO1366.rda
2392b83af68b4a3082f989cd4c00350d *inst/doc/Introduction.R
360e51ccf7fa41c5b7cf2dba11f881ab *inst/doc/Introduction.Rmd
2ec8a24828d2e1e51fcaf63ec6b6daa6 *inst/doc/Introduction.html
ea1c93d55f2e9dc66d8768a3c446fb6a *inst/doc/Multi-Objective_Optimization_case_study.R
8a513847a760def052244b50966e6532 *inst/doc/Multi-Objective_Optimization_case_study.Rmd
f63163f54ba520d4de5f2abcc6e10a3e *inst/doc/Multi-Objective_Optimization_case_study.html
9670cfb7dcda04eaa328e16ce0ac5540 *inst/doc/Tutorial.R
42ebcf701ebc838899a21fb9ccef32fe *inst/doc/Tutorial.Rmd
9bc43d103cfda8f1a65a6e304958d5c0 *inst/doc/Tutorial.html
a943092895f99968d46e1c1bbd353ec3 *inst/extdata/ecoli_core.tsv
8b172c8c23987911b75df955f09864c7 *inst/extdata/iAF1260.tsv
72adea6d99c6b505752469cd78080cbd *inst/extdata/iJO1366.tsv
e70e0d85c2bfc1061d8737849efc201f *man/decompose_metabolites.Rd
7ab01ffd3efe60e98992195767810c33 *man/ecoli_core.Rd
bb85a7ea157b2070d1cf232697d819dd *man/expanded_to_ROI.Rd
a3e38b7f1dc99236f611b0bed8f41fbe *man/expanded_to_glpk.Rd
e33f4b81bff310caadbd4489480d71d4 *man/expanded_to_gurobi.Rd
76e834c9c38bfd6b6c832f52c63c835a *man/expanded_to_reactiontbl.Rd
bce2a805afa74ffd4c703863a815bab9 *man/fbar.Rd
867c28a7e8b0534d841c909d37b0e23b *man/find_flux_variability_df.Rd
d15ba7a387c92c8e3443fe7be796ad0e *man/find_fluxes_df.Rd
85bb99c4cc9de1eb14ebf23f28205527 *man/gene_associate.Rd
cb3b7a7854377c17924472fc2df05161 *man/gene_eval.Rd
427e6d949fd58e4ed60cdb2912af10e2 *man/iJO1366.Rd
38a530eb583f031d2fe724f9f0a46214 *man/parse_met_list.Rd
552cd5cd0bf625b104d355aeeccb3a42 *man/reactiontbl_to_expanded.Rd
d8d44bc972a8d384e7f52577802e3e58 *man/reactiontbl_to_gurobi.Rd
de47ab1870b8a5ae1267525fb10109c6 *man/recompose_metabolites.Rd
3f8b5db0453ac72f6b769d0bb85a9af3 *man/split_on_arrow.Rd
3562b0c1e0992cfd819bd7b5bfa4f222 *tests/testthat.R
4a54ca8bbb0b4b53bb1c7a14b7eaeeeb *tests/testthat/test-ROI.R
9e05ff336e871c32ec1d0a756ead06db *tests/testthat/test-ROI_plugins.R
34adc89c356f6790084742eed6f54683 *tests/testthat/test-convenience.R
8443398b19adf6be68b911beb477a97f *tests/testthat/test-full-size.R
c40d803e0ec35081aecee2474191e165 *tests/testthat/test-gene_expression_processing.R
36b8557c3e9c74d85cba954ec1fe7310 *tests/testthat/test-metabolite-parsing.R
b311351055835dbb5fa24fca4fc1e713 *tests/testthat/test-parsing_and_conversion.R
360e51ccf7fa41c5b7cf2dba11f881ab *vignettes/Introduction.Rmd
8a513847a760def052244b50966e6532 *vignettes/Multi-Objective_Optimization_case_study.Rmd
42ebcf701ebc838899a21fb9ccef32fe *vignettes/Tutorial.Rmd
