Last updated on 2025-12-19 09:49:31 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.4 | 7.06 | 77.20 | 84.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.4 | 4.76 | 55.95 | 60.71 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.3 | 12.00 | 107.86 | 119.86 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.3 | 13.00 | 137.20 | 150.20 | ERROR | |
| r-devel-windows-x86_64 | 1.3 | 10.00 | 93.00 | 103.00 | ERROR | |
| r-patched-linux-x86_64 | 1.2.4 | 7.31 | 71.87 | 79.18 | OK | |
| r-release-linux-x86_64 | 1.2.4 | 6.87 | 71.50 | 78.37 | OK | |
| r-release-macos-arm64 | 1.2.4 | OK | ||||
| r-release-macos-x86_64 | 1.3 | 6.00 | 155.00 | 161.00 | OK | |
| r-release-windows-x86_64 | 1.2.4 | 8.00 | 94.00 | 102.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.3 | 7.00 | 175.00 | 182.00 | OK | |
| r-oldrel-windows-x86_64 | 1.3 | 13.00 | 117.00 | 130.00 | OK |
Version: 1.3
Check: examples
Result: ERROR
Running examples in ‘catregs-Ex.R’ failed
The error most likely occurred in:
> ### Name: compare.margins
> ### Title: Compares two marginal effects (MEMs or AMEs). Estimate of
> ### uncertainty is from a simulated draw from a normal distribution.
> ### Aliases: compare.margins
>
> ### ** Examples
>
> data("essUK")
> m1 <- glm(safe ~ religious + minority*female + age,data=essUK,family="binomial")
> des<-margins.des(m1,expand.grid(minority=c(0,1),female=c(0,1)))
> des
minority female religious age
1 0 0 3.602404 53.14563
2 1 0 3.602404 53.14563
3 0 1 3.602404 53.14563
4 1 1 3.602404 53.14563
> ma1 <- suppressWarnings(as.data.frame(marginaleffects::avg_slopes(m1,
+ variables="female",newdata=marginaleffects::datagrid(minority=0,
+ religious=3.6024,age=53.146))))
Error in `[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp) :
attempt access index 13/13 in VECTOR_ELT
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 1.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘compare.margins.Rmd’ using rmarkdown
Quitting from compare.margins.Rmd:15-29 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 13/13 in VECTOR_ELT
---
Backtrace:
▆
1. └─marginaleffects::comparisons(...)
2. ├─base::do.call("get_comparisons", args)
3. └─marginaleffects:::get_comparisons(...)
4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp]
5. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'compare.margins.Rmd' failed with diagnostics:
attempt access index 13/13 in VECTOR_ELT
--- failed re-building ‘compare.margins.Rmd’
--- re-building ‘count.fit.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘count.fit.Rmd’
--- re-building ‘daign.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘daign.Rmd’
--- re-building ‘first.diff.fitted.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘first.diff.fitted.Rmd’
--- re-building ‘list.coef.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘list.coef.Rmd’
--- re-building ‘margins.dat.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘margins.dat.Rmd’
--- re-building ‘margins.dat.clogit.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘margins.dat.clogit.Rmd’
--- re-building ‘margins.des.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘margins.des.Rmd’
--- re-building ‘rubins.rule.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘rubins.rule.Rmd’
--- re-building ‘second.diff.fitted.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘second.diff.fitted.Rmd’
SUMMARY: processing the following file failed:
‘compare.margins.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'compare.margins.Rmd' using rmarkdown
Quitting from compare.margins.Rmd:15-29 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 13/13 in VECTOR_ELT
---
Backtrace:
▆
1. └─marginaleffects::comparisons(...)
2. ├─base::do.call("get_comparisons", args)
3. └─marginaleffects:::get_comparisons(...)
4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp]
5. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'compare.margins.Rmd' failed with diagnostics:
attempt access index 13/13 in VECTOR_ELT
--- failed re-building 'compare.margins.Rmd'
--- re-building 'count.fit.Rmd' using rmarkdown
--- finished re-building 'count.fit.Rmd'
--- re-building 'daign.Rmd' using rmarkdown
--- finished re-building 'daign.Rmd'
--- re-building 'first.diff.fitted.Rmd' using rmarkdown
--- finished re-building 'first.diff.fitted.Rmd'
--- re-building 'list.coef.Rmd' using rmarkdown
--- finished re-building 'list.coef.Rmd'
--- re-building 'margins.dat.Rmd' using rmarkdown
--- finished re-building 'margins.dat.Rmd'
--- re-building 'margins.dat.clogit.Rmd' using rmarkdown
--- finished re-building 'margins.dat.clogit.Rmd'
--- re-building 'margins.des.Rmd' using rmarkdown
--- finished re-building 'margins.des.Rmd'
--- re-building 'rubins.rule.Rmd' using rmarkdown
--- finished re-building 'rubins.rule.Rmd'
--- re-building 'second.diff.fitted.Rmd' using rmarkdown
--- finished re-building 'second.diff.fitted.Rmd'
SUMMARY: processing the following file failed:
'compare.margins.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64