Last updated on 2025-12-19 09:49:40 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.42 | 189.07 | 199.49 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 186.00 | 208.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.29 | 246.27 | 261.56 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 182.00 | 193.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 213.00 | 223.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 239.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.049, elapsed: 2.011 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.589, system: 0.121, elapsed: 12.358 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.352 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.803, system: 0.210, elapsed: 4.751 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.961, system: 0.442, elapsed: 20.475 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.048, elapsed: 1.847 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.517, system: 0.161, elapsed: 11.200 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.019, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.160, system: 0.299, elapsed: 6.593 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.015, elapsed: 0.238 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.204, system: 0.594, elapsed: 20.957 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.748, system: 0.078, elapsed: 2.068 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.644, system: 0.250, elapsed: 16.704 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.014, elapsed: 0.559 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.085, system: 0.233, elapsed: 12.053 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.561 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.290, system: 0.256, elapsed: 2.723 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.828, system: 0.887, elapsed: 36.050 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.052, elapsed: 4.065 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.806, system: 0.231, elapsed: 18.059 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.020, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.130, system: 0.295, elapsed: 5.513 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.260, system: 0.912, elapsed: 16.495 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.836, system: 1.548, elapsed: 45.900 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.860, system: 0.099, elapsed: 3.405 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.000, system: 0.402, elapsed: 19.355 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.022, elapsed: 0.422 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.852, system: 0.233, elapsed: 6.930 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.007, elapsed: 0.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.668, system: 0.804, elapsed: 31.406 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.673, system: 0.047, elapsed: 2.292 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.700, system: 0.146, elapsed: 18.329 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.017, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.947, system: 0.196, elapsed: 7.176 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.293 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.246, system: 0.453, elapsed: 29.377 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.741, system: 0.056, elapsed: 3.132 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.648, system: 0.151, elapsed: 18.327 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.192, elapsed: 6.626 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.285 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.135, system: 0.266, elapsed: 1.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.372, system: 0.715, elapsed: 31.190 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.624, system: 0.038, elapsed: 2.540 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.654, system: 0.084, elapsed: 16.400 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.013, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.849, system: 0.187, elapsed: 7.398 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.384 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.802, system: 0.524, elapsed: 21.079 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.948, system: 0.876, elapsed: 49.251 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64