Last updated on 2025-12-20 09:49:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 9.23 | 174.67 | 183.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 6.38 | 61.66 | 68.04 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 16.00 | 140.52 | 156.52 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 14.00 | 142.49 | 156.49 | ERROR | |
| r-devel-windows-x86_64 | 0.1.1 | 10.00 | 153.00 | 163.00 | OK | |
| r-patched-linux-x86_64 | 0.1.1 | 9.50 | 154.69 | 164.19 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 8.83 | 154.49 | 163.32 | OK | |
| r-release-macos-arm64 | 0.1.1 | OK | ||||
| r-release-macos-x86_64 | 0.1.1 | 5.00 | 184.00 | 189.00 | OK | |
| r-release-windows-x86_64 | 0.1.1 | 11.00 | 142.00 | 153.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.1 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.1 | 5.00 | 155.00 | 160.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.1 | 16.00 | 194.00 | 210.00 | OK |
Version: 0.1.1
Check: examples
Result: ERROR
Running examples in ‘psmineR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ps_aggregated
> ### Title: Aggregated Performance Spectrum
> ### Aliases: ps_aggregated ps_aggregated.log ps_aggregated.grouped_log
>
> ### ** Examples
>
> library(psmineR)
> library(eventdataR)
>
> sepsis %>%
+ ps_aggregated(segment_coverage = 0.2,
+ classification = "quartile",
+ grouping = "start",
+ bins = 15)
Error in `[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, :
attempt access index 9/9 in VECTOR_ELT
Calls: %>% ... filter_segments -> build_classifier -> [ -> [.data.table
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(psmineR)
>
> test_check("psmineR")
Saving _problems/test_ps_aggregated-13.R
Saving _problems/test_ps_aggregated-14.R
Saving _problems/test_ps_aggregated-160.R
Saving _problems/test_ps_aggregated-161.R
Saving _problems/test_ps_aggregated-174.R
Saving _problems/test_ps_aggregated-176.R
Saving _problems/test_ps_detailed-13.R
Saving _problems/test_ps_detailed-18.R
Saving _problems/test_ps_detailed-141.R
Saving _problems/test_ps_detailed-146.R
Saving _problems/test_ps_detailed-160.R
Saving _problems/test_ps_detailed-166.R
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test_ps_aggregated.R:70:1', 'test_ps_aggregated.R:90:1',
'test_ps_aggregated.R:110:1', 'test_ps_aggregated.R:120:1',
'test_ps_detailed.R:46:1', 'test_ps_detailed.R:71:1',
'test_ps_detailed.R:91:1', 'test_ps_detailed.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_ps_aggregated.R:9:3'): test ps_aggregated on eventlog ────────
Expected `ps <- patients %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_aggregated(), NA) at test_ps_aggregated.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:14:3'): test ps_aggregated on eventlog ─────────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:14:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:156:3'): test ps_aggregated on activitylog ───
Expected `ps <- patients_act %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:156:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:161:3'): test ps_aggregated on activitylog ─────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:161:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:169:3'): test ps_aggregated on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:169:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.grouped_log(.)
10. │ └─psmineR:::ps_aggregated.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:176:3'): test ps_aggregated on grouped_activitylog ──
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:176:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_detailed.R:9:3'): test ps_detailed on eventlog ────────────
Expected `ps <- patients %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:14:3'): test ps_detailed on eventlog ─────────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:14:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:137:3'): test ps_detailed on activitylog ───────
Expected `ps <- patients_act %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:137:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:142:3'): test ps_detailed on activitylog ─────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:142:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:155:3'): test ps_detailed on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:155:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:161:3'): test ps_detailed on grouped_activitylog ──
Error in ``[.data.table`(dt, , `:=`(start_t = do.call(pmin, c(na.rm = TRUE, .SD)), end_t = do.call(pmax, c(na.rm = TRUE, .SD))), .SDcols = TIMESTAMP_CLASSIFIERS, by = c(case_id(log), activity_id(log), "ACTIVITY_INSTANCE", classification))`: attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:161:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘introduction_to_psmineR.Rmd’ using rmarkdown
Quitting from introduction_to_psmineR.Rmd:30-33 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 9/9 in VECTOR_ELT
---
Backtrace:
▆
1. ├─traffic_fines %>% ps_detailed()
2. ├─psmineR::ps_detailed(.)
3. ├─psmineR:::ps_detailed.log(.)
4. │ └─psmineR:::get_segments(...)
5. │ └─... %>% order_segments(log)
6. ├─psmineR:::order_segments(., log)
7. │ └─data.table::setorderv(dt, cols = "start_t")
8. │ └─base::is.data.frame(x)
9. ├─psmineR:::filter_segments(...)
10. └─psmineR:::build_classifier(., classification)
11. ├─...[]
12. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introduction_to_psmineR.Rmd' failed with diagnostics:
attempt access index 9/9 in VECTOR_ELT
--- failed re-building ‘introduction_to_psmineR.Rmd’
SUMMARY: processing the following file failed:
‘introduction_to_psmineR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: examples
Result: ERROR
Running examples in ‘psmineR-Ex.R’ failed
The error most likely occurred in:
> ### Name: ps_aggregated
> ### Title: Aggregated Performance Spectrum
> ### Aliases: ps_aggregated ps_aggregated.log ps_aggregated.grouped_log
>
> ### ** Examples
>
> library(psmineR)
> library(eventdataR)
>
> sepsis %>%
+ ps_aggregated(segment_coverage = 0.2,
+ classification = "quartile",
+ grouping = "start",
+ bins = 15)
Error in `[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, :
attempt access index 9/9 in VECTOR_ELT
Calls: %>% ... filter_segments -> build_classifier -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [12s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(psmineR)
>
> test_check("psmineR")
Saving _problems/test_ps_aggregated-13.R
Saving _problems/test_ps_aggregated-14.R
Saving _problems/test_ps_aggregated-160.R
Saving _problems/test_ps_aggregated-161.R
Saving _problems/test_ps_aggregated-174.R
Saving _problems/test_ps_aggregated-176.R
Saving _problems/test_ps_detailed-13.R
Saving _problems/test_ps_detailed-18.R
Saving _problems/test_ps_detailed-141.R
Saving _problems/test_ps_detailed-146.R
Saving _problems/test_ps_detailed-160.R
Saving _problems/test_ps_detailed-166.R
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test_ps_aggregated.R:70:1', 'test_ps_aggregated.R:90:1',
'test_ps_aggregated.R:110:1', 'test_ps_aggregated.R:120:1',
'test_ps_detailed.R:46:1', 'test_ps_detailed.R:71:1',
'test_ps_detailed.R:91:1', 'test_ps_detailed.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_ps_aggregated.R:9:3'): test ps_aggregated on eventlog ────────
Expected `ps <- patients %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_aggregated(), NA) at test_ps_aggregated.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:14:3'): test ps_aggregated on eventlog ─────────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:14:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:156:3'): test ps_aggregated on activitylog ───
Expected `ps <- patients_act %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:156:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:161:3'): test ps_aggregated on activitylog ─────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:161:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:169:3'): test ps_aggregated on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:169:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.grouped_log(.)
10. │ └─psmineR:::ps_aggregated.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:176:3'): test ps_aggregated on grouped_activitylog ──
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:176:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_detailed.R:9:3'): test ps_detailed on eventlog ────────────
Expected `ps <- patients %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:14:3'): test ps_detailed on eventlog ─────────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:14:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:137:3'): test ps_detailed on activitylog ───────
Expected `ps <- patients_act %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:137:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:142:3'): test ps_detailed on activitylog ─────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:142:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:155:3'): test ps_detailed on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:155:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:161:3'): test ps_detailed on grouped_activitylog ──
Error in ``[.data.table`(dt, , `:=`(start_t = do.call(pmin, c(na.rm = TRUE, .SD)), end_t = do.call(pmax, c(na.rm = TRUE, .SD))), .SDcols = TIMESTAMP_CLASSIFIERS, by = c(case_id(log), activity_id(log), "ACTIVITY_INSTANCE", classification))`: attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:161:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘introduction_to_psmineR.Rmd’ using rmarkdown
Quitting from introduction_to_psmineR.Rmd:30-33 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 9/9 in VECTOR_ELT
---
Backtrace:
▆
1. ├─traffic_fines %>% ps_detailed()
2. ├─psmineR::ps_detailed(.)
3. ├─psmineR:::ps_detailed.log(.)
4. │ └─psmineR:::get_segments(...)
5. │ └─... %>% order_segments(log)
6. ├─psmineR:::order_segments(., log)
7. │ └─data.table::setorderv(dt, cols = "start_t")
8. │ └─base::is.data.frame(x)
9. ├─psmineR:::filter_segments(...)
10. └─psmineR:::build_classifier(., classification)
11. ├─...[]
12. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introduction_to_psmineR.Rmd' failed with diagnostics:
attempt access index 9/9 in VECTOR_ELT
--- failed re-building ‘introduction_to_psmineR.Rmd’
SUMMARY: processing the following file failed:
‘introduction_to_psmineR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(psmineR)
>
> test_check("psmineR")
Saving _problems/test_ps_aggregated-13.R
Saving _problems/test_ps_aggregated-14.R
Saving _problems/test_ps_aggregated-160.R
Saving _problems/test_ps_aggregated-161.R
Saving _problems/test_ps_aggregated-174.R
Saving _problems/test_ps_aggregated-176.R
Saving _problems/test_ps_detailed-13.R
Saving _problems/test_ps_detailed-18.R
Saving _problems/test_ps_detailed-141.R
Saving _problems/test_ps_detailed-146.R
Saving _problems/test_ps_detailed-160.R
Saving _problems/test_ps_detailed-166.R
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test_ps_aggregated.R:70:1', 'test_ps_aggregated.R:90:1',
'test_ps_aggregated.R:110:1', 'test_ps_aggregated.R:120:1',
'test_ps_detailed.R:46:1', 'test_ps_detailed.R:71:1',
'test_ps_detailed.R:91:1', 'test_ps_detailed.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_ps_aggregated.R:9:3'): test ps_aggregated on eventlog ────────
Expected `ps <- patients %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_aggregated(), NA) at test_ps_aggregated.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:14:3'): test ps_aggregated on eventlog ─────────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:14:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:156:3'): test ps_aggregated on activitylog ───
Expected `ps <- patients_act %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:156:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:161:3'): test ps_aggregated on activitylog ─────
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:161:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_aggregated.R:169:3'): test ps_aggregated on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_aggregated()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_aggregated.R:169:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_aggregated()
8. ├─psmineR::ps_aggregated(.)
9. ├─psmineR:::ps_aggregated.grouped_log(.)
10. │ └─psmineR:::ps_aggregated.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_aggregated.R:176:3'): test ps_aggregated on grouped_activitylog ──
Error in `eval(code, test_env)`: object 'ps' not found
Backtrace:
▆
1. └─testthat::expect_s3_class(ps, "ggplot") at test_ps_aggregated.R:176:3
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Failure ('test_ps_detailed.R:9:3'): test ps_detailed on eventlog ────────────
Expected `ps <- patients %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:9:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:14:3'): test ps_detailed on eventlog ─────────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(ps <- patients %>% ps_detailed(), NA) at test_ps_detailed.R:14:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:137:3'): test ps_detailed on activitylog ───────
Expected `ps <- patients_act %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:137:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:142:3'): test ps_detailed on activitylog ─────────
Error in ``[.data.table`(dt, , `:=`((classification), fcase(delta <= quantile(delta, 0.25), 1L, delta <= quantile(delta, 0.5), 2L, delta <= quantile(delta, 0.75), 3L, default = 4L)), by = "segment")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:142:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.log(.)
10. │ └─psmineR:::get_segments(...)
11. │ └─... %>% order_segments(log)
12. ├─psmineR:::order_segments(., log)
13. │ └─data.table::setorderv(dt, cols = "start_t")
14. │ └─base::is.data.frame(x)
15. ├─psmineR:::filter_segments(...)
16. └─psmineR:::build_classifier(., classification)
17. ├─...[]
18. └─data.table:::`[.data.table`(...)
── Failure ('test_ps_detailed.R:155:3'): test ps_detailed on grouped_activitylog ──
Expected `ps <- patients_act %>% group_by_resource() %>% ps_detailed()` not to throw any errors.
Actually got a <simpleError> with message:
attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_ps_detailed.R:155:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
── Error ('test_ps_detailed.R:161:3'): test ps_detailed on grouped_activitylog ──
Error in ``[.data.table`(dt, , `:=`(start_t = do.call(pmin, c(na.rm = TRUE, .SD)), end_t = do.call(pmax, c(na.rm = TRUE, .SD))), .SDcols = TIMESTAMP_CLASSIFIERS, by = c(case_id(log), activity_id(log), "ACTIVITY_INSTANCE", classification))`: attempt access index 8/8 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_ps_detailed.R:161:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─patients_act %>% group_by_resource() %>% ps_detailed()
8. ├─psmineR::ps_detailed(.)
9. ├─psmineR:::ps_detailed.grouped_log(.)
10. │ └─psmineR:::ps_detailed.log(...)
11. │ └─psmineR:::get_segments(...)
12. │ └─... %>% order_segments(log)
13. ├─psmineR:::order_segments(., log)
14. │ └─data.table::setorderv(dt, cols = "start_t")
15. │ └─base::is.data.frame(x)
16. ├─psmineR:::filter_segments(...)
17. ├─psmineR:::build_classifier(., classification)
18. └─psmineR:::construct_segments(., classification)
19. └─psmineR:::construct_segments.activitylog(...)
20. ├─...[]
21. └─data.table:::`[.data.table`(...)
[ FAIL 12 | WARN 2 | SKIP 8 | PASS 6 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc