Reversion mutations are secondary mutations that reverse the deleterious effects of an original pathogenic mutation, partially or fully restoring the gene's function. The revert package detects reversion mutations for a specific pathogenic mutation from DNA-seq bam files.
| Version: |
1.0.0 |
| Depends: |
R (≥ 4.4.0) |
| Imports: |
BSgenome, BiocGenerics, Biostrings, GenomeInfoDb, GenomicRanges, IRanges, Rsamtools, S4Vectors, ensembldb, pwalign, stats, utils |
| Suggests: |
knitr, rmarkdown, futile.logger, BSgenome.Hsapiens.UCSC.hg19, EnsDb.Hsapiens.v75, BSgenome.Hsapiens.UCSC.hg38, EnsDb.Hsapiens.v86 |
| Published: |
2025-12-17 |
| DOI: |
10.32614/CRAN.package.revert |
| Author: |
Hui Xiao [aut, cre],
Stephen Pettitt [aut],
Syed Haider [aut] |
| Maintainer: |
Hui Xiao <hui.xiao at icr.ac.uk> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| CRAN checks: |
revert results |